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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
22
total RNA-seq
17
ATAC-seq
5
DNase-seq
4
pCHi-C
Assay category
37
DNA binding
22
DNA accessibility
22
Transcription
Target of assay
26
histone
26
histone modification
16
broad histone mark
11
control
10
narrow histone mark
Date released
63
October, 2019
17
February, 2023
3
June, 2019
2
February, 2020
Available data
45
bam
45
bed narrowPeak
34
bigWig
29
bigBed narrowPeak
8
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
Organism
85
Homo sapiens
Biosample type
85
tissue
Organ
847
pancreas
705
liver
662
connective tissue
483
adipose tissue
epithelium
387
heart
354
kidney
230
vasculature
224
blood vessel
168
brain
159
bone element
135
artery
122
limb
81
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
85
AMP
Genome assembly (visualization)
49
hg19
34
GRCh38
Lab
85
AMP-T2D consortium
files.file_type!
tagAlign
zippedFastqFolder
organ_slims!
epithelium
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
tibial nerve
35
5
1
2
islet of Langerhans
2
14
1
4
retina
3
15
3
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