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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
78
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
78
DNA binding
5
DNA accessibility
Target of assay
52
histone
52
histone modification
28
narrow histone mark
24
broad histone mark
19
control
7
transcription factor
2
RNA binding protein
Date released
172
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
58
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
168
bam
168
fastq
159
bigWig
89
tsv
49
bed narrowPeak
19
bed bed3+
17
bigBed narrowPeak
tagAlign
12
bed broadPeak
Organism
172
Homo sapiens
Biosample type
131
tissue
41
primary cell
Organ
172
pancreas
103
connective tissue
49
adipose tissue
34
liver
29
epithelium
11
musculature of body
Project
172
AMP
Genome assembly (visualization)
147
hg19
146
GRCh38
Lab
172
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
files.file_type!
tagAlign
target.investigated_as!
other context
BIOSAMPLE
ASSAY
172 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
33
1
1
pancreas
7
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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