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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
354
ChIP-seq
2
total RNA-seq
Assay category
354
DNA binding
2
Transcription
Target of assay
259
transcription factor
89
control
66
recombinant protein
51
histone
51
histone modification
RNA binding protein
28
broad histone mark
23
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
707
February, 2021
318
August, 2017
304
May, 2021
294
August, 2021
291
May, 2020
291
November, 2017
265
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
63
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
420
bam
336
fastq
335
bigWig
312
bed narrowPeak
311
bigBed narrowPeak
tagAlign
63
bed broadPeak
57
bigBed broadPeak
2
tar
2
tsv
Organism
356
Homo sapiens
Biosample type
269
cell line
79
tissue
8
primary cell
Organ
269
liver
47
pancreas
22
brain
18
adipose tissue
18
connective tissue
6
epithelium
4
vasculature
2
blood vessel
Project
356
AMP
Genome assembly (visualization)
265
hg19
231
GRCh38
Lab
356
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent control run_type
files.file_type!
tagAlign
organ_slims!
esophagus
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
356 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
269
tissue
body of pancreas
28
endocrine pancreas
16
subcutaneous adipose tissue
10
layer of hippocampus
8
omental fat pad
8
+ See 3 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic acinar cell
2
See all biosamples
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