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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
338
transcription factor
82
recombinant protein
80
control
58
RNA binding protein
45
histone modification
44
histone
24
broad histone mark
23
chromatin remodeller
20
narrow histone mark
2
other context
2
other post-translational modification
Date released
7
August, 2017
7
December, 2017
2
August, 2021
2
November, 2017
2
October, 2019
Available data
52
bigWig
51
bed narrowPeak
50
bam
tagAlign
19
fastq
14
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
20
Homo sapiens
Biosample type
11
tissue
5
in vitro differentiated cells
4
cell line
Organ
66
pancreas
63
brain
46
epithelium
40
heart
26
connective tissue
26
vasculature
25
blood vessel
20
liver
15
kidney
15
limb
9
adipose tissue
8
embryo
8
musculature of body
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
Project
20
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
tagAlign
organ_slims!
intestine
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
tissue
liver
9
right lobe of liver
2
in vitro differentiated cells
hepatocyte
5
cell line
HepG2
4
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