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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
191
DNase-seq
52
ChIP-seq
6
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
192
DNA accessibility
52
DNA binding
6
DNA methylation
1
Transcription
Target of assay
19
histone
19
histone modification
19
transcription factor
14
control
11
narrow histone mark
8
broad histone mark
6
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
712
February, 2021
399
May, 2021
357
August, 2017
306
October, 2019
220
August, 2021
216
June, 2019
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
250
bam
236
bigWig
230
bed narrowPeak
230
bigBed narrowPeak
191
bed bed3+
191
bed broadPeak
191
bigBed broadPeak
35
fastq
6
bed bedMethyl
6
bigBed bedMethyl
1
csv
Organism
251
Homo sapiens
Biosample type
182
tissue
54
primary cell
15
cell line
Organ
81
kidney
liver
43
musculature of body
35
heart
32
brain
32
limb
20
epithelium
19
connective tissue
18
ureter
15
blood
15
bodily fluid
11
pancreas
9
spleen
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
Project
251
AMP
Genome assembly (visualization)
235
GRCh38
207
hg19
Lab
251
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
files.file_type!
tagAlign bed3+
xls
organ_slims!
liver
BIOSAMPLE
ASSAY
251 results
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Clear Filters
DNase-seq
ChIP-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 16 more…
cell line
GM12878
15
See all biosamples
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