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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
25
ATAC-seq
19
total RNA-seq
1
Hi-C
Assay category
80
DNA binding
25
DNA accessibility
19
Transcription
1
3D chromatin structure
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
278
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2023
4
December, 2019
4
March, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
123
bam
90
bed narrowPeak
84
bigWig
64
bigBed narrowPeak
19
tsv
1
bedpe bed3+
1
hic
Organism
125
Homo sapiens
Biosample type
120
tissue
5
in vitro differentiated cells
Organ
57
heart
55
pancreas
23
kidney
epithelium
1
adipose tissue
1
connective tissue
Project
125
AMP
Genome assembly (visualization)
110
hg19
108
GRCh38
Lab
125
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tagAlign bed3+
lab.title!
Maike Sander, UCSD
organ_slims!
epithelium
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
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in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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