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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
25
total RNA-seq
7
ATAC-seq
Assay category
74
Transcription
7
DNA accessibility
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
313
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
74
tsv
56
bigWig
51
fastq
49
bam
Organism
81
Homo sapiens
Biosample type
50
primary cell
31
tissue
Organ
47
pancreas
40
epithelium
12
brain
4
connective tissue
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
74
AMP
7
HPAP
Genome assembly (visualization)
56
GRCh38
49
hg19
Lab
74
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
1
inconsistent ontology term
files.file_type!
tagAlign bed3+
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
81 results
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single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic alpha cell
3
5
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
+ See 5 more…
tissue
islet of Langerhans
6
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 21 more…
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