Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
4
DNase-seq
3
total RNA-seq
1
ATAC-seq
1
Hi-C
Assay category
40
DNA binding
5
DNA accessibility
3
Transcription
1
3D chromatin structure
Target of assay
33
histone
33
histone modification
23
broad histone mark
10
narrow histone mark
7
control
Date released
66
February, 2021
50
May, 2019
46
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
0
April, 2019
Available data
46
bam
36
bigWig
34
bed narrowPeak
33
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
3
tsv
1
hic
tar
Organism
49
Homo sapiens
Biosample type
29
tissue
20
primary cell
Organ
98
brain
72
limb
68
heart
53
kidney
49
blood vessel
49
vasculature
43
nerve
34
epithelium
28
artery
22
eye
20
vein
19
pancreas
8
liver
6
connective tissue
4
gonad
4
ovary
3
adipose tissue
2
musculature of body
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
49
AMP
Genome assembly (visualization)
36
hg19
33
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
tar
BIOSAMPLE
ASSAY
49 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
Hi-C
tissue
tibial artery
23
2
1
1
ascending aorta
1
coronary artery
1
primary cell
endothelial cell of umbilical vein
17
2
1
Download