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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
878
candidate regulatory elements
863
accessible chromatin
817
binding sites
523
target gene predictions
144
eQTL
140
variant allelic effects
111
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
September, 2022
2412
February, 2021
333
November, 2021
311
February, 2024
301
May, 2021
289
June, 2020
155
May, 2020
106
January, 2022
101
October, 2022
79
August, 2021
72
January, 2020
56
January, 2021
49
March, 2020
49
May, 2022
November, 2022
39
May, 2024
35
August, 2017
31
February, 2023
19
April, 2020
17
February, 2020
14
November, 2019
14
October, 2019
13
March, 2023
9
August, 2018
9
May, 2019
8
April, 2019
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4243
bed bed3+
tsv
531
bigWig
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4488
Homo sapiens
Biosample type
1788
cell line
1423
primary cell
1046
tissue
272
in vitro differentiated cells
4
stem cell
Organ
469
epithelium
276
connective tissue
219
brain
176
kidney
157
musculature of body
157
pancreas
142
bodily fluid
137
blood
130
vasculature
124
embryo
122
intestine
120
heart
100
lung
100
skin of body
97
blood vessel
89
limb
84
liver
74
large intestine
69
uterus
58
eye
48
stomach
47
extraembryonic component
45
mammary gland
43
bone element
42
adipose tissue
38
artery
38
lymph node
38
prostate gland
34
penis
30
adrenal gland
27
small intestine
25
placenta
25
ureter
24
gonad
22
esophagus
16
thymus
16
vein
15
spleen
14
spinal cord
13
lymphatic vessel
13
testis
12
pituitary gland
10
bone marrow
10
bronchus
10
nerve
10
ovary
10
thyroid gland
9
skeleton
8
lymphoid tissue
6
breast
6
mouth
5
trachea
3
tongue
3
urinary bladder
3
vagina
1
nose
1
pericardium
Project
4109
AMP
333
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4355
hg19
965
GRCh38
4
hg18
files.file_type!
tsv
txt
month_released!
November, 2022
September, 2022
BIOSAMPLE
TYPE
4535 results
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table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
accessible chromatin
binding sites
target gene predictions
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 742 more…
primary cell
monocyte
86
18
1
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
4
5
1
endothelial cell
1
3
15
2
7
1
2
1
2
fibroblast
3
16
1
4
2
6
macrophage
3
12
3
7
3
1
+ See 336 more…
tissue
islet of Langerhans
1
5
2
1
13
1
3
2
2
2
kidney
2
15
10
1
1
1
2
heart
1
18
5
1
1
2
2
stomach
1
21
3
2
1
liver
2
6
4
1
3
7
2
1
+ See 226 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
1
adipocyte
1
2
3
1
4
4
embryonic stem cell
1
5
1
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 100 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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