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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
4
DNase-seq
3
ChIP-seq
1
RRBS
Assay category
31
DNA accessibility
3
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
27
February, 2023
October, 2019
7
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
35
Homo sapiens
Biosample type
30
tissue
5
primary cell
Organ
610
liver
511
pancreas
336
epithelium
306
kidney
219
heart
202
connective tissue
175
brain
121
vasculature
115
blood vessel
101
bone element
89
adipose tissue
87
musculature of body
69
blood
69
bodily fluid
57
artery
50
limb
35
eye
24
spleen
23
embryo
19
lung
18
ureter
16
skeleton
1
bone marrow
1
pericardium
1
thymus
1
vein
Project
35
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
35
AMP-T2D consortium
files.file_type!
tsv
vcf
month_released!
October, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
DNase-seq
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
3
1
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