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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
3
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
298
October, 2019
218
June, 2019
152
May, 2020
120
May, 2019
117
February, 2021
94
December, 2017
88
November, 2018
87
February, 2023
80
April, 2019
74
October, 2018
47
September, 2018
43
July, 2019
42
May, 2021
41
November, 2019
38
August, 2021
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
19
March, 2020
11
September, 2017
8
January, 2018
4
July, 2018
May, 2022
2
November, 2020
1
August, 2018
1
August, 2022
1
December, 2019
1
May, 2023
1
October, 2022
Available data
tsv
20
bigWig
16
bam
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
19
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
8
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
5
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
tsv
zippedFastqFolder
month_released!
May, 2022
BIOSAMPLE
ASSAY
19 results
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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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