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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1709candidate regulatory elements
  • 1245target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685accessible chromatin
  • 144eQTL
  • 88variant allelic effects
  • 43gene expression
  • 13caQTL
  • 9differential activity
  • 7sQTL
  • 5hQTL
  • 3meQTL
  • 3other
  • 3pQTL
  • 2Fine-mapped variants
  • 2variant to gene
Date released
  • 2511September, 2022
  • 2412February, 2021
  • 301May, 2021
  • 289June, 2020
  • 258February, 2024
  • 155May, 2020
  • 105January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49March, 2020
  • 44November, 2022
  • 43May, 2022
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 19April, 2020
  • 17February, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1June, 2021
Available data
  • 5691bed bed3+
  • tsv
  • 869bed bed9
  • 324bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6652Homo sapiens
Collection Tags
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 942ENCODE
  • 399DGA
  • 329T1D
  • 181BLUEPRINT
  • 1744DN
  • 112 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 85AMP
  • 73T2DKP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 2441tissue
  • 2330cell line
  • 1527primary cell
  • 395in vitro differentiated cells
  • 4stem cell
Organ
  • 483epithelium
  • 400brain
  • 398kidney
  • 348musculature of body
  • 346connective tissue
  • 300lung
  • 264intestine
  • 227limb
  • 218heart
  • 217bodily fluid
  • 206blood
  • 203embryo
  • 197vasculature
  • 191skin of body
  • 180pancreas
  • 166large intestine
  • 154blood vessel
  • 143extraembryonic component
  • 124liver
  • 106stomach
  • 103eye
  • 84bone element
  • 80mammary gland
  • 80small intestine
  • 79uterus
  • 76prostate gland
  • 71placenta
  • 67adipose tissue
  • 64penis
  • 64ureter
  • 62lymph node
  • 61adrenal gland
  • 59artery
  • 48thymus
  • 46gonad
  • 38spinal cord
  • 37esophagus
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 22vein
  • 20ovary
  • 19nerve
  • 19thyroid gland
  • 18mouth
  • 18skeleton
  • 16lymphatic vessel
  • 13bronchus
  • 12bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 6604AMP
  • 60T1D
  • 19LungMap
  • 11community
  • 5ITG
Genome assembly (visualization)
  • 6513hg19
  • 1464GRCh38
  • 4hg18
files.file_type!
  • tsv
lab.title!
  • Bing Ren, UCSD
BIOSAMPLE
TYPE

6699 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
accessible chromatin
eQTL
variant allelic effects
gene expression
caQTL
differential activity
sQTL
hQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
tissue
heart3720121152
stomach402111931
kidney291421611011
brain29163181221
lung3317161
cell line
HeLa-S355531
A549211911821
H1-hESC1391121
K5627231721
MCF-7962531
primary cell
monocyte2861184121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell743013
B cell171083
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell5515410
adipocyte461614
embryonic stem cell11516
mesenchymal stem cell331211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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