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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 1709candidate regulatory elements
  • 1224accessible chromatin
  • 977histone modifications
  • 913chromatin state
  • 817binding sites
  • 331differential activity
  • 141variant allelic effects
  • 139eQTL
  • 33gene expression
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 3meQTL
  • 3other
  • 3pQTL
  • 2Fine-mapped variants
  • 2variant to gene
Date released
  • 2511September, 2022
  • 2412February, 2021
  • 1984July, 2026
  • 333November, 2021
  • 320May, 2026
  • 301May, 2021
  • 289June, 2020
  • 282February, 2024
  • 155May, 2020
  • 106January, 2022
  • 96October, 2022
  • 79August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49March, 2020
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 31February, 2023
  • 19April, 2020
  • 17February, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 4August, 2017
  • 4March, 2026
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1June, 2021
Available data
  • 8015bed bed3+
  • tsv
  • 869bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9288Homo sapiens
Collection Tags
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 948ENCODE
  • 425DGA
  • 424AMP
  • 405T2DKP
  • 393HDMA
  • 329T1D
  • 320pyxis
  • 181BLUEPRINT
  • 1744DN
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 89 T2DKP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 3269primary cell
  • 3094tissue
  • 2532cell line
  • 435in vitro differentiated cells
  • 3stem cell
Organ
  • 830brain
  • 727blood
  • 618epithelium
  • 505kidney
  • 459heart
  • 441connective tissue
  • 438lung
  • 351intestine
  • 344musculature of body
  • 293skin of body
  • 242pancreas
  • 227limb
  • 221large intestine
  • 215bodily fluid
  • 211liver
  • 204embryo
  • 203vasculature
  • 179blood vessel
  • 174extraembryonic component
  • 159eye
  • 137stomach
  • 121adipose tissue
  • 111muscle organ
  • 103mammary gland
  • 102bone element
  • 101adrenal gland
  • 97placenta
  • 96small intestine
  • 93thymus
  • 91uterus
  • 86prostate gland
  • 73ureter
  • 72artery
  • 64penis
  • 62gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 46esophagus
  • 46thyroid gland
  • 44spinal cord
  • 31ovary
  • 30testis
  • 24skeleton
  • 23lymphoid tissue
  • 22vein
  • 20mouth
  • 19nerve
  • 16bronchus
  • 16lymphatic vessel
  • 14breast
  • 13bone marrow
  • 12pituitary gland
  • 12urinary bladder
  • 11tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8903AMP
  • 333ENCODE
  • 60T1D
  • 19LungMap
  • 15community
  • 5ITG
Genome assembly (visualization)
  • 6841hg19
  • 3787GRCh38
  • 4hg18
files.file_type!
  • tsv
lab.title!
  • Stephen Parker, UMich
BIOSAMPLE
TYPE

9335 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
differential activity
variant allelic effects
eQTL
gene expression
caQTL
sQTL
hQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
primary cell
monocyte21886144121
fibroblast2834011062
endothelial cell17322122521
CD8-positive, alpha-beta T cell2774301
T-cell644
tissue
heart383751211121
stomach424031191
kidney282910216111
brain30292318112
head of caudate nucleus86
cell line
A549332111182
HeLa-S359531
K5623071162
H1-hESC3911112
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911101
neural progenitor cell6510154
adipocyte744121
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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