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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
42
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
1
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
February, 2024
2
January, 2022
1
February, 2020
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
170
Homo sapiens
Biosample type
131
tissue
32
cell line
7
primary cell
Organ
549
epithelium
381
kidney
380
brain
369
connective tissue
342
musculature of body
309
lung
280
intestine
217
limb
210
heart
201
skin of body
189
bodily fluid
178
blood
175
vasculature
173
pancreas
169
large intestine
154
embryo
146
extraembryonic component
136
blood vessel
115
stomach
109
liver
104
eye
86
mammary gland
84
bone element
84
small intestine
76
prostate gland
73
placenta
71
adrenal gland
64
adipose tissue
64
penis
62
lymph node
61
ureter
54
artery
48
gonad
48
thymus
41
esophagus
38
spinal cord
33
spleen
30
uterus
25
testis
22
lymphoid tissue
22
ovary
21
thyroid gland
20
vein
18
mouth
18
skeleton
16
lymphatic vessel
16
nerve
15
bronchus
12
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
164
AMP
6
ENCODE
Genome assembly (visualization)
167
hg19
41
GRCh38
files.file_type!
tsv
month_released!
February, 2024
May, 2020
BIOSAMPLE
TYPE
170 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
26
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
2
1
1
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
pericardium fibroblast
1
See all biosamples
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