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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 1709candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 331differential activity
  • 144eQTL
  • 141variant allelic effects
  • 45gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 3meQTL
  • 3other
  • 3pQTL
  • 2Fine-mapped variants
  • 2variant to gene
Date released
  • 2511September, 2022
  • 2412February, 2021
  • 1984July, 2026
  • 333November, 2021
  • 320May, 2026
  • 311February, 2024
  • 301May, 2021
  • 289June, 2020
  • 155May, 2020
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49March, 2020
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 19April, 2020
  • 17February, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 4March, 2026
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1June, 2021
Available data
  • 8068bed bed3+
  • tsv
  • 869bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9353Homo sapiens
Collection Tags
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 948ENCODE
  • 459DGA
  • 424AMP
  • 406T2DKP
  • 393HDMA
  • 329T1D
  • 320pyxis
  • 181BLUEPRINT
  • 1744DN
  • 133CATlas
  • 122 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 3309primary cell
  • 3109tissue
  • 2537cell line
  • 439in vitro differentiated cells
  • 4stem cell
Organ
  • 836brain
  • 729blood
  • 625epithelium
  • 505kidney
  • 459heart
  • 453connective tissue
  • 439lung
  • 361musculature of body
  • 355intestine
  • 294skin of body
  • 243pancreas
  • 227limb
  • 224large intestine
  • 217bodily fluid
  • 213liver
  • 205embryo
  • 204vasculature
  • 180blood vessel
  • 174extraembryonic component
  • 159eye
  • 138stomach
  • 122adipose tissue
  • 111muscle organ
  • 104mammary gland
  • 102bone element
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 91uterus
  • 86prostate gland
  • 73ureter
  • 72artery
  • 64penis
  • 62gonad
  • 62lymph node
  • 62spleen
  • 60__MARKER__
  • 46esophagus
  • 46thyroid gland
  • 44spinal cord
  • 31ovary
  • 30testis
  • 24skeleton
  • 23lymphoid tissue
  • 23vein
  • 20mouth
  • 19nerve
  • 16bronchus
  • 16lymphatic vessel
  • 14breast
  • 13bone marrow
  • 12pituitary gland
  • 12urinary bladder
  • 11tongue
  • 11vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8968AMP
  • 333ENCODE
  • 60T1D
  • 19LungMap
  • 15community
  • 5ITG
Genome assembly (visualization)
  • 6906hg19
  • 3787GRCh38
  • 4hg18
files.file_type!
  • tsv
month_released!
  • July, 2025
BIOSAMPLE
TYPE

9400 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
differential activity
eQTL
variant allelic effects
gene expression
caQTL
sQTL
hQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
primary cell
monocyte21886144121
fibroblast2834011026
endothelial cell1732312251212
CD8-positive, alpha-beta T cell2774301
T-cell644
tissue
heart383751211121
stomach424031191
kidney282910216111
brain30292318121
head of caudate nucleus86
cell line
A549332111182
HeLa-S359531
K5623071172
H1-hESC3911112
MCF-71391253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911101
neural progenitor cell6510154
adipocyte744161
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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