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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
14
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
RRBS
Assay category
29
DNA accessibility
14
Transcription
3
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
27
February, 2023
23
October, 2019
June, 2019
1
July, 2019
Available data
28
bed narrowPeak
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
1
tagAlign
Organism
51
Homo sapiens
Biosample type
50
tissue
1
primary cell
Organ
615
liver
525
pancreas
348
epithelium
249
kidney
230
brain
190
heart
188
connective tissue
161
vasculature
157
blood vessel
101
bone element
89
adipose tissue
limb
81
artery
69
blood
69
bodily fluid
49
eye
44
musculature of body
38
nerve
24
spleen
23
embryo
22
vein
19
lung
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
51
AMP
Genome assembly (visualization)
29
hg19
1
GRCh38
Lab
51
AMP-T2D consortium
files.file_type!
tsv
month_released!
June, 2019
organ_slims!
limb
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
2
14
4
2
retina
15
pigmented layer of retina
12
pituitary gland
1
primary cell
retinal pigment epithelial cell
1
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