Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1709candidate regulatory elements
  • 1313target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 816binding sites
  • 144eQTL
  • 141variant allelic effects
  • 39gene expression
  • 13caQTL
  • 9differential activity
  • 7sQTL
  • 5hQTL
  • 3meQTL
  • 3other
  • 3pQTL
  • 2Fine-mapped variants
  • 2variant to gene
Date released
  • 2511September, 2022
  • 2412February, 2021
  • 333November, 2021
  • 311February, 2024
  • 301May, 2021
  • 289June, 2020
  • 155May, 2020
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 56January, 2021
  • March, 2020
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 19April, 2020
  • 17February, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1June, 2021
Available data
  • 6039bed bed3+
  • tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6996Homo sapiens
Collection Tags
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 948ENCODE
  • 424AMP
  • 411DGA
  • 406T2DKP
  • 329T1D
  • 181BLUEPRINT
  • 1744DN
  • 111 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 2411tissue
  • 2326cell line
  • 1915primary cell
  • 387in vitro differentiated cells
  • 2stem cell
Organ
  • 628epithelium
  • 402connective tissue
  • 401kidney
  • 398brain
  • 358musculature of body
  • 309lung
  • 284intestine
  • 227limb
  • 222heart
  • 217bodily fluid
  • 206blood
  • 204embryo
  • 202skin of body
  • 202vasculature
  • 197pancreas
  • 171large intestine
  • 154blood vessel
  • 146extraembryonic component
  • 123liver
  • 116stomach
  • 107eye
  • 87mammary gland
  • 85bone element
  • 83small intestine
  • 81uterus
  • 77prostate gland
  • 73placenta
  • 71adrenal gland
  • 65adipose tissue
  • 64penis
  • 64ureter
  • 62lymph node
  • 59artery
  • 48thymus
  • 47gonad
  • 42esophagus
  • 38spinal cord
  • 32spleen
  • 25testis
  • 23lymphoid tissue
  • 22thyroid gland
  • 21ovary
  • 21vein
  • 19lymphatic vessel
  • 19nerve
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9vagina
  • 8urinary bladder
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 6615AMP
  • 333ENCODE
  • 60T1D
  • 19LungMap
  • 11community
  • 5ITG
Genome assembly (visualization)
  • 6861hg19
  • 1803GRCh38
  • 4hg18
files.file_type!
  • tsv
month_released!
  • March, 2020
BIOSAMPLE
TYPE

7043 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
eQTL
variant allelic effects
gene expression
caQTL
differential activity
sQTL
hQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
tissue
heart3719121512
stomach402111931
kidney291421610111
brain29163182121
muscle of arm33161611
cell line
HeLa-S355531
A549211911812
H1-hESC1391112
K5627231712
MCF-7962513
primary cell
monocyte2861814121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753014
B cell171086
endothelial cell3711521212
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell5415410
adipocyte461641
embryonic stem cell1561
mesenchymal stem cell331211
stem cell
H1-hESC1
undifferentiated ESC (H9 cell line)1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego