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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
5
RRBS
2
ATAC-seq
2
Hi-C
1
DNase-seq
Assay category
33
DNA binding
5
DNA methylation
3
DNA accessibility
2
3D chromatin structure
Target of assay
28
histone
28
histone modification
16
broad histone mark
12
narrow histone mark
5
control
Date released
26
August, 2017
11
June, 2019
2
March, 2020
May, 2022
2
October, 2019
1
January, 2018
1
July, 2019
Available data
30
bigWig
23
bed narrowPeak
18
bam
16
tagAlign
14
bed broadPeak
9
bigBed narrowPeak
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
bed bed3+
1
bigBed broadPeak
Organism
43
Homo sapiens
Biosample type
31
tissue
12
primary cell
Organ
577
liver
425
pancreas
330
kidney
288
epithelium
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
limb
101
bone element
90
adipose tissue
85
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
43
AMP
Genome assembly (visualization)
29
hg19
10
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
files.file_type!
tsv
month_released!
May, 2022
organ_slims!
limb
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
RRBS
ATAC-seq
Hi-C
DNase-seq
tissue
skeletal muscle tissue
22
4
1
psoas muscle
2
islet of Langerhans
1
pituitary gland
1
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
1
1
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