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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
4
ATAC-seq
1
Hi-C
Assay category
24
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
322
August, 2017
315
November, 2017
226
May, 2021
213
October, 2019
200
May, 2022
196
August, 2021
188
February, 2023
188
June, 2019
156
February, 2021
152
May, 2020
94
December, 2017
92
May, 2019
86
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
May, 2024
36
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
40
bam
40
fastq
31
bigWig
16
bed narrowPeak
tsv
1
bed broadPeak
1
bedpe
1
hic
Organism
29
Homo sapiens
Biosample type
24
in vitro differentiated cells
5
tissue
Organ
9
embryo
5
pancreas
Project
29
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
24
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
2
inconsistent control read length
files.file_type!
tsv
organ_slims!
brain
small intestine
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
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tissue
islet of Langerhans
4
1
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