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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 10Hi-C
  • 3ChIP-seq
  • 2ATAC-seq
  • 2pCHi-C
  • 2total RNA-seq
Assay category
  • 103D chromatin structure
  • 3DNA binding
  • 2DNA accessibility
  • 2Transcription
Target of assay
  • 3histone
  • 3histone modification
  • 3narrow histone mark
Date released
  • 406November, 2017
  • 322August, 2017
  • 298October, 2019
  • 226May, 2021
  • 218June, 2019
  • 200May, 2022
  • 196August, 2021
  • 189February, 2023
  • 156February, 2021
  • 152May, 2020
  • 120May, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 74October, 2018
  • 59September, 2020
  • 47September, 2018
  • 47September, 2023
  • 43July, 2019
  • 41November, 2019
  • 40May, 2024
  • 35December, 2018
  • 25January, 2019
  • 24February, 2018
  • 23October, 2017
  • 19April, 2020
  • 19March, 2020
  • 16January, 2021
  • 15May, 2023
  • 12November, 2020
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4July, 2018
  • 4October, 2022
  • 1August, 2018
  • 1August, 2022
  • 1December, 2019
Available data
  • tsv
  • 20bigWig
  • 16bam
  • 12bedpe bed3+
  • 10hic
  • 3bed narrowPeak
  • 2ibed
Organism
  • 19Homo sapiens
Biosample type
  • 12tissue
  • 4in vitro differentiated cells
  • 2cell line
  • 1primary cell
Organ
  • 8pancreas
  • 3epithelium
  • 2blood vessel
  • 2heart
  • 2musculature of body
  • 2vasculature
  • 1liver
  • 1vein
Project
  • 14AMP
  • 5T1D
Genome assembly (visualization)
  • 17hg19
  • 3GRCh38
Lab
  • 19AMP-T2D consortium
Audit category:
  • 6inconsistent ontology term
files.file_type!
  • tsv
BIOSAMPLE
ASSAY

19 results

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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans212
psoas muscle2
aorta1
heart left ventricle1
heart right ventricle1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)11
lymphocyte of B lineage (iPSC)11
cell line
EndoC_BH111
primary cell
endothelial cell of umbilical vein1
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