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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 165ChIP-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 9total RNA-seq
  • 1DNAme array
Assay category
  • 165DNA binding
  • 34DNA accessibility
  • 9Transcription
  • 1DNA methylation
Target of assay
  • 140histone
  • 140histone modification
  • 76broad histone mark
  • 64narrow histone mark
  • 16transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 406November, 2017
  • 322August, 2017
  • 298October, 2019
  • 226May, 2021
  • 218June, 2019
  • 200May, 2022
  • 196August, 2021
  • 189February, 2023
  • 156February, 2021
  • 152May, 2020
  • 120May, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 74October, 2018
  • 59September, 2020
  • 47September, 2018
  • 47September, 2023
  • 43July, 2019
  • 41November, 2019
  • 40May, 2024
  • 35December, 2018
  • 25January, 2019
  • 24February, 2018
  • 23October, 2017
  • 19April, 2020
  • 19March, 2020
  • 16January, 2021
  • 15May, 2023
  • 12November, 2020
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4July, 2018
  • 4October, 2022
  • 1August, 2018
  • 1August, 2022
  • 1December, 2019
Available data
  • 303bigWig
  • 277bam
  • tsv
  • 133bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 226Homo sapiens
Biosample type
  • 154primary cell
  • 53in vitro differentiated cells
  • 17cell line
  • 2tissue
Organ
  • 21pancreas
  • 20epithelium
  • 1bone element
  • 1bone marrow
  • 1connective tissue
  • 1thymus
Project
  • 124AMP
  • 102T1D
Genome assembly (visualization)
  • 143hg19
  • 103GRCh38
Lab
  • 184Kyle Gaulton, UCSD
  • 42AMP-T2D consortium
Audit category:
  • 21inconsistent ontology term
files.file_type!
  • tsv
BIOSAMPLE
ASSAY

226 results

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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
monocyte8513111
CD8-positive, alpha-beta T cell3312
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
in vitro differentiated cells
embryonic stem cell3755
cardiomyocytes3
pancreatic PP cell3
cell line
EndoC_BH1116
tissue
pancreas1
thymus1
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