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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
63
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
391
November, 2017
319
August, 2017
273
October, 2019
226
May, 2021
200
May, 2022
189
February, 2023
156
February, 2021
152
May, 2020
137
June, 2019
115
May, 2019
91
December, 2017
81
November, 2018
74
October, 2018
66
August, 2021
59
September, 2020
57
April, 2019
47
September, 2018
41
November, 2019
40
May, 2024
38
July, 2019
33
December, 2018
24
February, 2018
23
October, 2017
19
April, 2020
19
January, 2019
19
March, 2020
16
January, 2021
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
May, 2023
Available data
81
fastq
80
bam
73
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
81
Homo sapiens
Biosample type
54
cell line
26
tissue
1
primary cell
Organ
48
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
81
AMP
Genome assembly (visualization)
72
GRCh38
64
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
missing controlled_by
files.file_type!
tsv
organ_slims!
kidney
skin of body
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
13
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 2 more…
primary cell
pancreatic cell
1
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