Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 19candidate regulatory elements
  • 13target gene predictions
  • 11eQTL
  • 10chromatin state
  • 7accessible chromatin
  • 3variant allelic effects
  • 2binding sites
  • 1gene expression
  • 1histone modifications
Date released
  • 24September, 2022
  • 15February, 2021
  • 6August, 2021
  • 3January, 2020
  • 3January, 2022
  • 3May, 2020
  • 3May, 2021
  • 2August, 2017
  • 2March, 2020
  • 2September, 2018
  • 1February, 2020
  • 1June, 2020
  • 1November, 2022
Available data
  • 55bed bed3+
  • tsv
  • 8bed bed9
  • 5bigWig
  • 1bigBed bed9
Organism
  • 67Homo sapiens
Collection Tags
  • 24EpiMap
  • 12ENCODE
  • 10DGA
  • 9T2DKP
  • 7AMP
  • 6 T2DKP
  • 4ChIP-Atlas
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 1CMDGA
Biosample type
  • 62tissue
  • 3cell line
  • 1in vitro differentiated cells
  • 1primary cell
Organ
  • 634epithelium
  • 405connective tissue
  • 401kidney
  • 400brain
  • 361musculature of body
  • 310lung
  • 286intestine
  • 228heart
  • 227limb
  • 217bodily fluid
  • 206blood
  • 205embryo
  • 205vasculature
  • 202skin of body
  • 201pancreas
  • 172large intestine
  • 157blood vessel
  • 146extraembryonic component
  • 130liver
  • 117stomach
  • 107eye
  • 87mammary gland
  • 85bone element
  • 84small intestine
  • 81uterus
  • 77prostate gland
  • 73placenta
  • 72adrenal gland
  • 67adipose tissue
  • 64penis
  • 64ureter
  • 62lymph node
  • 59artery
  • 49thymus
  • 48gonad
  • 43esophagus
  • 38spinal cord
  • 33spleen
  • 25testis
  • 23lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 22vein
  • 19lymphatic vessel
  • 19nerve
  • 18mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 12breast
  • 12pituitary gland
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 67AMP
Genome assembly (visualization)
  • 61hg19
  • 15GRCh38
  • 2hg18
files.file_type!
  • tsv
BIOSAMPLE
TYPE

67 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
eQTL
chromatin state
accessible chromatin
variant allelic effects
binding sites
gene expression
histone modifications
tissue
adipose tissue7846211
omental fat pad52122
subcutaneous adipose tissue25121
subcutaneous abdominal adipose tissue51
omental fat pad1
cell line
adipose tissue derived mesenchymal stem cell11
adipose-derived mesenchymal stem cell1
in vitro differentiated cells
white adipose cell1
primary cell
mesenchymal stem cell of adipose1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego