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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 99ChIP-seq
  • 46ATAC-seq
  • 9DNase-seq
  • 5Hi-C
  • 2WGBS
  • 1FAIRE-seq
Assay category
  • 99DNA binding
  • 56DNA accessibility
  • 53D chromatin structure
  • 2DNA methylation
Target of assay
  • 70histone
  • 70histone modification
  • 45broad histone mark
  • 25narrow histone mark
  • 21control
  • 8transcription factor
  • 4RNA binding protein
Date released
  • 50May, 2019
  • 47October, 2019
  • 35February, 2023
  • 14February, 2021
  • 6July, 2019
  • 5June, 2019
  • 3November, 2017
  • 2March, 2020
Available data
  • 180bam
  • 150bigWig
  • 129bed narrowPeak
  • 79bigBed narrowPeak
  • tsv
  • 13bed broadPeak
  • 13bigBed broadPeak
  • 11bed bed3+
  • 6tagAlign
  • 3fastq
  • 3hic
  • 2bedpe bed3+
  • 2hdf5
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tar
Organism
  • 162Homo sapiens
Biosample type
  • 119tissue
  • 29primary cell
  • 14cell line
Organ
  • 617liver
  • 529pancreas
  • 368epithelium
  • 330kidney
  • 260brain
  • 225heart
  • 206connective tissue
  • 168vasculature
  • 162blood vessel
  • 115limb
  • 101bone element
  • 90adipose tissue
  • 87musculature of body
  • 83artery
  • 69blood
  • 69bodily fluid
  • 56eye
  • 38nerve
  • 24spleen
  • 23embryo
  • 22vein
  • 19lung
  • 18ureter
  • 16skeleton
  • 4gonad
  • 4ovary
  • 2pituitary gland
  • 1bone marrow
  • 1lymph node
  • 1pericardium
  • 1skin of body
  • 1thymus
Project
  • 162AMP
Genome assembly (visualization)
  • 129GRCh38
  • 101hg19
Lab
  • 162AMP-T2D consortium
Audit category:
  • 1audit script error
files.file_type!
  • tsv
BIOSAMPLE
ASSAY

162 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
WGBS
FAIRE-seq
tissue
coronary artery5362
tibial artery2312
ascending aorta161
thoracic aorta161
aorta1312
primary cell
endothelial cell of umbilical vein17221
brain microvascular endothelial cell311
endothelial cell of hepatic sinusoid1
kidney capillary endothelial cell1
cell line
smooth muscle cell of the coronary artery68
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