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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
9
DNA accessibility
8
DNA binding
Target of assay
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
histone
1
histone modification
1
narrow histone mark
Date released
8
January, 2021
3
January, 2019
3
November, 2018
2
December, 2018
1
January, 2018
Available data
8
bam
8
fastq
3
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
9
cell line
8
primary cell
Organ
359
pancreas
290
kidney
266
epithelium
177
liver
111
heart
101
bone element
88
connective tissue
88
vasculature
84
blood vessel
70
brain
66
limb
58
artery
54
musculature of body
52
eye
41
adipose tissue
19
lung
18
ureter
17
blood
17
bodily fluid
16
skeleton
14
nerve
12
spleen
8
embryo
7
vein
1
bone marrow
1
pericardium
pituitary gland
1
skin of body
1
thymus
Project
9
AMP
8
T1D
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
9
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
tsv
organ_slims!
pituitary gland
target.investigated_as!
histone
transcription factor
BIOSAMPLE
ASSAY
17 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
8
1
primary cell
peripheral blood mononuclear cell
8
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