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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
target gene predictions
81
candidate regulatory elements
77
accessible chromatin
45
chromatin state
18
binding sites
17
histone modifications
14
eQTL
11
variant allelic effects
9
gene expression
2
Fine-mapped variants
2
differential activity
2
sQTL
Date released
125
September, 2022
78
February, 2021
73
February, 2024
22
May, 2021
20
January, 2021
20
November, 2021
14
June, 2020
8
August, 2021
7
August, 2018
6
March, 2023
6
May, 2020
6
October, 2019
5
March, 2020
4
August, 2017
4
January, 2022
3
January, 2020
2
November, 2019
1
April, 2019
1
June, 2021
1
October, 2022
Available data
337
bed bed3+
tsv
59
bigWig
40
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
406
Homo sapiens
Biosample type
144
cell line
132
tissue
101
primary cell
28
in vitro differentiated cells
1
stem cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
364
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
387
hg19
137
GRCh38
files.file_type!
tsv
organ_slims!
heart
tongue
BIOSAMPLE
TYPE
406 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
gene expression
Fine-mapped variants
differential activity
sQTL
cell line
H1-hESC
39
1
1
1
2
1
H9
8
7
1
EndoC_BH1
1
8
1
2
H7-hESC
2
1
1
1
1
HUES6
1
2
1
1
1
+ See 20 more…
tissue
islet of Langerhans
1
6
3
2
1
13
1
2
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
5
8
4
1
chorionic villus
4
8
4
endocrine pancreas
4
7
4
+ See 12 more…
primary cell
trophoblast cell
5
7
1
4
1
pancreatic ductal cell
3
6
1
2
1
1
pancreatic beta cell
3
8
1
1
pancreatic alpha cell
3
7
1
1
pancreatic acinar cell
3
6
1
1
+ See 10 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
trophoblast cell
2
2
1
ectodermal cell
1
2
1
cardiac mesoderm primordium
1
1
1
+ See 1 more…
stem cell
H1-hESC
1
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