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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
176
accessible chromatin
116
target gene predictions
96
candidate regulatory elements
51
chromatin state
41
binding sites
38
variant allelic effects
26
histone modifications
19
gene expression
3
eQTL
2
caQTL
2
differential activity
Date released
145
September, 2022
116
November, 2021
106
February, 2021
58
February, 2024
23
June, 2020
20
January, 2021
17
May, 2021
14
May, 2020
13
January, 2020
11
August, 2021
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
2
March, 2023
2
May, 2022
1
February, 2023
1
November, 2019
Available data
494
bed bed3+
tsv
153
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
570
Homo sapiens
Biosample type
486
primary cell
38
tissue
34
cell line
12
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
stomach
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
425
AMP
116
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
545
hg19
211
GRCh38
files.file_type!
tsv
organ_slims!
eye
placenta
stomach
BIOSAMPLE
TYPE
570 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
3
1
1
1
2
4
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 85 more…
tissue
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
endothelial cell
1
+ See 11 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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