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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
accessible chromatin
148
candidate regulatory elements
144
target gene predictions
75
chromatin state
43
binding sites
33
variant allelic effects
32
histone modifications
12
gene expression
2
caQTL
2
differential activity
2
eQTL
Date released
217
September, 2022
131
February, 2021
118
November, 2021
59
February, 2024
24
June, 2020
20
January, 2021
20
May, 2021
15
November, 2022
11
February, 2023
10
May, 2024
8
May, 2020
6
August, 2018
6
January, 2020
6
March, 2020
6
October, 2022
5
April, 2020
5
October, 2019
4
August, 2021
3
August, 2017
2
March, 2023
2
May, 2022
1
February, 2020
1
January, 2022
1
November, 2019
Available data
591
bed bed3+
153
bigWig
tsv
72
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
681
Homo sapiens
Biosample type
473
primary cell
150
tissue
35
cell line
23
in vitro differentiated cells
Organ
635
epithelium
403
connective tissue
kidney
399
brain
361
musculature of body
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
130
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
536
AMP
118
ENCODE
20
T1D
5
LungMap
2
community
Genome assembly (visualization)
665
hg19
241
GRCh38
files.file_type!
tsv
organ_slims!
kidney
lung
BIOSAMPLE
TYPE
681 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
caQTL
differential activity
eQTL
primary cell
endothelial cell
15
3
7
2
2
1
1
2
1
hepatocyte
8
2
3
1
1
2
4
4
endothelial cell of umbilical vein
2
6
4
5
2
1
foreskin keratinocyte
11
4
4
trophoblast cell
1
7
5
4
1
+ See 81 more…
tissue
placenta
1
26
15
14
1
2
1
pigmented layer of retina
20
chorionic villus
8
4
4
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
HTR-8/Svneo
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
+ See 1 more…
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