Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
83
candidate regulatory elements
80
target gene predictions
74
accessible chromatin
50
chromatin state
15
eQTL
11
histone modifications
11
variant allelic effects
9
gene expression
8
binding sites
2
Fine-mapped variants
2
differential activity
2
sQTL
Date released
143
September, 2022
58
February, 2021
22
February, 2024
21
November, 2021
20
January, 2021
20
May, 2021
10
June, 2020
8
August, 2021
7
August, 2018
6
March, 2023
6
May, 2020
6
October, 2019
5
January, 2022
4
March, 2020
3
August, 2017
3
January, 2020
2
November, 2019
1
April, 2019
1
June, 2021
1
October, 2022
Available data
271
bed bed3+
tsv
60
bigWig
46
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
347
Homo sapiens
Biosample type
195
tissue
119
primary cell
28
cell line
5
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
304
AMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
327
hg19
94
GRCh38
files.file_type!
tsv
organ_slims!
liver
testis
BIOSAMPLE
TYPE
347 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
eQTL
histone modifications
variant allelic effects
gene expression
binding sites
Fine-mapped variants
differential activity
sQTL
tissue
placenta
26
15
1
14
1
2
1
islet of Langerhans
1
6
3
13
1
1
2
2
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
8
5
4
1
chorionic villus
8
4
4
+ See 12 more…
primary cell
trophoblast cell
7
5
1
4
1
pancreatic ductal cell
3
6
2
1
1
1
pancreatic beta cell
3
8
1
1
pancreatic alpha cell
3
7
1
1
pancreatic acinar cell
3
6
1
1
+ See 16 more…
cell line
EndoC_BH1
1
8
1
2
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
HTR-8/Svneo
1
1
1
+ See 2 more…
in vitro differentiated cells
trophoblast cell
2
2
1
See all biosamples
Download