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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
14
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
33
DNA accessibility
14
Transcription
5
DNA binding
1
DNA methylation
Target of assay
4
histone
4
histone modification
4
narrow histone mark
1
RNA binding protein
control
1
transcription factor
Date released
27
February, 2023
23
October, 2019
6
June, 2019
1
July, 2019
Available data
34
bed narrowPeak
7
bam
7
bigWig
6
bigBed narrowPeak
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
Organism
57
Homo sapiens
Biosample type
53
tissue
4
primary cell
Organ
476
pancreas
427
liver
338
epithelium
311
kidney
232
brain
205
heart
171
connective tissue
146
vasculature
141
blood vessel
101
bone element
98
limb
81
musculature of body
74
artery
66
adipose tissue
63
blood
63
bodily fluid
55
eye
27
nerve
20
vein
19
lung
18
ureter
16
embryo
16
skeleton
16
spleen
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
57
AMP
Genome assembly (visualization)
35
hg19
7
GRCh38
Lab
57
AMP-T2D consortium
files.file_type!
tsv
target.investigated_as!
control
recombinant protein
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
islet of Langerhans
2
14
2
4
retina
15
3
pigmented layer of retina
12
pituitary gland
1
primary cell
retinal pigment epithelial cell
2
1
1
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