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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
103
target gene predictions
83
chromatin state
29
accessible chromatin
9
histone modifications
6
binding sites
5
variant allelic effects
4
eQTL
Date released
233
September, 2022
100
February, 2021
28
November, 2021
13
June, 2020
8
February, 2024
8
May, 2021
5
August, 2017
4
January, 2022
3
March, 2020
1
October, 2022
Available data
321
bed bed3+
78
bed bed9
16
bigWig
tsv
Organism
403
Homo sapiens
Biosample type
335
tissue
34
cell line
34
primary cell
Organ
635
epithelium
403
connective tissue
401
kidney
brain
361
musculature of body
310
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
130
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
375
AMP
28
ENCODE
Genome assembly (visualization)
399
hg19
112
GRCh38
files.file_type!
tsv
organ_slims!
brain
BIOSAMPLE
TYPE
403 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
variant allelic effects
eQTL
tissue
stomach
40
21
19
3
1
1
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 17 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
parietal cell
1
1
1
peptic cell
1
1
1
+ See 7 more…
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