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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
candidate regulatory elements
48
target gene predictions
40
chromatin state
11
accessible chromatin
6
binding sites
5
histone modifications
3
eQTL
Date released
110
September, 2022
50
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2022
1
March, 2020
1
October, 2022
Available data
150
bed bed3+
37
bed bed9
3
bigWig
tsv
Organism
190
Homo sapiens
Biosample type
142
tissue
38
cell line
10
primary cell
Organ
635
epithelium
403
connective tissue
401
kidney
399
brain
361
musculature of body
310
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
130
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
testis
23
lymphoid tissue
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
184
AMP
6
ENCODE
Genome assembly (visualization)
187
hg19
48
GRCh38
files.file_type!
tsv
organ_slims!
ovary
testis
BIOSAMPLE
TYPE
190 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACC112
2
1
1
HCT-116 cell
1
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
3
fibroblast of gingiva
2
1
1
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