Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
37
DNase-seq
9
ATAC-seq
4
Hi-C
3
WGBS
Assay category
86
DNA binding
46
DNA accessibility
4
3D chromatin structure
3
DNA methylation
Target of assay
55
histone
55
histone modification
38
broad histone mark
25
control
17
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
65
October, 2019
32
June, 2019
9
November, 2018
7
December, 2018
7
January, 2019
7
May, 2019
6
February, 2021
5
July, 2019
1
October, 2017
Available data
138
bam
107
bigWig
106
bed narrowPeak
97
bigBed narrowPeak
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
24
fastq
tsv
3
bed bedMethyl
3
bigBed bedMethyl
Organism
139
Homo sapiens
Biosample type
139
tissue
Organ
617
liver
529
pancreas
368
epithelium
330
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
139
AMP
Genome assembly (visualization)
108
GRCh38
106
hg19
Lab
139
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
tsv
organ_slims!
vein
BIOSAMPLE
ASSAY
139 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial nerve
35
2
1
tibial artery
23
2
1
spleen
20
1
1
2
muscle of leg
7
13
1
muscle of arm
17
+ See 10 more…
See all biosamples
Download