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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
candidate regulatory elements
24
accessible chromatin
21
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
7
eQTL
4
gene expression
4
variant allelic effects
1
caQTL
Date released
46
September, 2022
22
February, 2021
16
February, 2024
10
August, 2021
7
March, 2020
5
June, 2020
5
November, 2021
3
August, 2017
3
May, 2020
3
May, 2021
2
January, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
103
bed bed3+
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
130
Homo sapiens
Biosample type
51
tissue
47
primary cell
28
cell line
4
in vitro differentiated cells
Organ
635
epithelium
403
connective tissue
401
kidney
399
brain
361
musculature of body
310
lung
286
intestine
228
heart
227
limb
217
bodily fluid
206
blood
205
embryo
205
vasculature
202
skin of body
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
130
liver
117
stomach
107
eye
87
mammary gland
85
bone element
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
lymphatic vessel
19
nerve
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
125
AMP
5
ENCODE
Genome assembly (visualization)
122
hg19
49
GRCh38
2
hg18
files.file_type!
tsv
organ_slims!
small intestine
urinary bladder
BIOSAMPLE
TYPE
130 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
caQTL
tissue
liver
13
4
10
9
2
1
7
1
right lobe of liver
2
1
1
primary cell
hepatocyte
2
8
3
1
4
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
2
3
1
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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