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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
candidate regulatory elements
22
target gene predictions
17
chromatin state
8
binding sites
7
accessible chromatin
7
histone modifications
2
eQTL
1
variant allelic effects
Date released
51
September, 2022
33
February, 2021
6
June, 2020
3
May, 2021
2
January, 2022
2
November, 2021
1
February, 2024
1
March, 2020
Available data
80
bed bed3+
17
bed bed9
tsv
1
bigWig
Organism
99
Homo sapiens
Biosample type
53
cell line
34
tissue
12
primary cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
pericardium
Project
97
AMP
2
ENCODE
Genome assembly (visualization)
97
hg19
21
GRCh38
files.file_type!
tsv
organ_slims!
pericardium
vasculature
BIOSAMPLE
TYPE
99 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 5 more…
tissue
ovary
8
6
4
1
1
prostate gland
4
2
2
2
1
2
1
primary cell
epithelial cell of prostate
4
3
2
luteal cell
1
1
luminal epithelial cell of prostatic duct
1
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