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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 871candidate regulatory elements
  • 817binding sites
  • 144eQTL
  • 141variant allelic effects
  • 43gene expression
  • 13caQTL
  • 9differential activity
  • 7sQTL
  • 5hQTL
  • 3meQTL
  • 3other
  • 3pQTL
  • 2Fine-mapped variants
  • 2variant to gene
Date released
  • 2511September, 2022
  • 1575February, 2021
  • 333November, 2021
  • 310February, 2024
  • 301May, 2021
  • 289June, 2020
  • 155May, 2020
  • 106January, 2022
  • 101October, 2022
  • 79August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49March, 2020
  • 49May, 2022
  • 44November, 2022
  • 38May, 2024
  • 35August, 2017
  • 31February, 2023
  • 19April, 2020
  • 17February, 2020
  • 14November, 2019
  • 14October, 2019
  • 13March, 2023
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5September, 2023
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1June, 2021
Available data
  • 5246bed bed3+
  • tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 6207Homo sapiens
Collection Tags
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 459DGA
  • 424AMP
  • 406T2DKP
  • 329T1D
  • 181BLUEPRINT
  • 1744DN
  • 122 T2DKP
  • 111T2D
  • 110ENCODE
  • 101eQTLCatalogue
  • 97CMDGA
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 2182cell line
  • 1963tissue
  • 1752primary cell
  • 351in vitro differentiated cells
  • 4stem cell
Organ
  • 582epithelium
  • 365connective tissue
  • 349brain
  • 317kidney
  • 283musculature of body
  • 249lung
  • 228intestine
  • 195bodily fluid
  • 194heart
  • 190pancreas
  • 186blood
  • 179limb
  • 179vasculature
  • 175embryo
  • 161skin of body
  • 137blood vessel
  • 136large intestine
  • 121liver
  • 120extraembryonic component
  • 98eye
  • 89stomach
  • 76uterus
  • 74bone element
  • 73mammary gland
  • 66small intestine
  • 63prostate gland
  • 60placenta
  • 58adrenal gland
  • 56adipose tissue
  • 55artery
  • 49lymph node
  • 46penis
  • 46ureter
  • 40thymus
  • 39gonad
  • 33esophagus
  • 30spinal cord
  • 24spleen
  • 20testis
  • 19lymphoid tissue
  • 18ovary
  • 18thyroid gland
  • 18vein
  • 17lymphatic vessel
  • 17skeleton
  • 16nerve
  • 14bronchus
  • 14mouth
  • 12bone marrow
  • 12pituitary gland
  • 9breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 5826AMP
  • 333ENCODE
  • 60T1D
  • 19LungMap
  • 11community
  • 5ITG
Genome assembly (visualization)
  • 6068hg19
  • 1803GRCh38
  • 4hg18
files.file_type!
  • tsv
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

6254 results

search-icontable-tab-icon
Clear Filters
target gene predictions
histone modifications
chromatin state
accessible chromatin
candidate regulatory elements
binding sites
eQTL
variant allelic effects
gene expression
caQTL
differential activity
sQTL
hQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S355331
A549191181182
H1-hESC3911112
K5622317162
MCF-7625153
tissue
heart2012151912
stomach211193191
brain16318216121
kidney142161014111
lung1716161
primary cell
monocyte2861814121
CD8-positive, alpha-beta T cell53014
common myeloid progenitor, CD34-positive141313
B cell108611
endothelial cell7115321212
in vitro differentiated cells
neural progenitor cell5154104
hematopoietic multipotent progenitor cell101101101
adipocyte616421
embryonic stem cell11561
mesenchymal stem cell312121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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