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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
45
total RNA-seq
1
single cell RNA-seq
Assay category
77
DNA accessibility
46
Transcription
Date released
594
February, 2021
400
November, 2017
382
August, 2017
296
May, 2020
279
October, 2019
256
August, 2021
198
June, 2019
138
May, 2021
135
July, 2018
123
February, 2023
115
May, 2019
95
July, 2019
95
May, 2022
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
Available data
53
bed narrowPeak
39
fastq
14
tsv
10
bed bed3
txt
4
bed bed3+
3
bed bedgraph
3
bigWig
Organism
123
Homo sapiens
Biosample type
59
tissue
51
primary cell
13
in vitro differentiated cells
Organ
epithelium
38
pancreas
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
4
bone element
4
skeleton
1
adipose tissue
1
brain
Project
84
AMP
39
HPAP
Genome assembly (visualization)
35
GRCh38
30
hg19
Lab
84
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
files.file_type!
txt
lab.title!
Kyle Gaulton, UCSD
month_released!
March, 2020
organ_slims!
epithelium
BIOSAMPLE
ASSAY
123 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
tissue
coronary artery
35
retina
15
2
acetabular part of hip bone
1
adipose tissue
1
brain
1
+ See 4 more…
primary cell
exocrine cell
39
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
2
adipocyte
1
1
preadipocyte
1
1
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