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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
60
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
Organism
69
Homo sapiens
Biosample type
61
cell line
8
primary cell
Organ
926
pancreas
liver
682
connective tissue
518
epithelium
490
adipose tissue
386
heart
290
kidney
284
brain
232
vasculature
226
blood vessel
141
artery
122
limb
90
musculature of body
71
bone element
69
blood
69
bodily fluid
eye
43
nerve
37
embryo
24
spleen
21
vein
19
lung
18
ureter
12
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
61
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
61
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
txt
month_released!
March, 2020
organ_slims!
eye
liver
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
60
1
primary cell
peripheral blood mononuclear cell
8
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