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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
12
ATAC-seq
2
pCHi-C
1
ChIP-seq
Assay category
58
Transcription
12
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
66
February, 2021
4
February, 2023
1
March, 2020
1
May, 2021
1
October, 2019
Available data
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
73
Homo sapiens
Biosample type
72
tissue
1
primary cell
Organ
940
pancreas
791
liver
684
connective tissue
524
epithelium
adipose tissue
393
heart
292
kidney
286
brain
236
vasculature
230
blood vessel
141
artery
122
limb
95
musculature of body
71
bone element
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
72
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
72
AMP-T2D consortium
1
Kyle Gaulton, UCSD
files.file_type!
txt
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
73 results
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total RNA-seq
ATAC-seq
pCHi-C
ChIP-seq
tissue
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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primary cell
megakaryocyte
1
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