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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
338
transcription factor
167
histone modification
166
histone
127
control
85
broad histone mark
82
recombinant protein
81
narrow histone mark
58
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
27
May, 2020
21
October, 2019
13
August, 2017
7
December, 2017
7
November, 2017
4
August, 2021
2
May, 2019
Available data
71
bigWig
70
bam
70
bed narrowPeak
40
tagAlign
33
bigBed narrowPeak
19
fastq
6
bed broadPeak
6
bigBed broadPeak
2
bed bed3+
Organism
81
Homo sapiens
Biosample type
59
tissue
9
cell line
8
primary cell
5
in vitro differentiated cells
Organ
117
brain
73
pancreas
60
liver
49
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
81
AMP
Genome assembly (visualization)
71
hg19
59
GRCh38
Lab
79
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
txt
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
tissue
liver
42
tibial nerve
8
tibial artery
4
muscle of leg
2
right lobe of liver
2
+ See 1 more…
cell line
HepG2
9
primary cell
endothelial cell of umbilical vein
6
hepatocyte
2
in vitro differentiated cells
hepatocyte
5
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