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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
12
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
6
November, 2018
3
December, 2018
1
March, 2020
October, 2017
Available data
15
bam
15
bigWig
15
fastq
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
888
pancreas
683
liver
648
connective tissue
494
epithelium
466
adipose tissue
373
heart
278
kidney
242
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
16
AMP-T2D consortium
files.file_type!
xls
month_released!
October, 2017
target.investigated_as!
control
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
12
2
1
1
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