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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 910accessible chromatin
  • 726binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 138variant allelic effects
  • 84Fine-mapped variants
  • 7sQTL
  • 6caQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2590February, 2021
  • 2508September, 2022
  • 389May, 2021
  • 378February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5983bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • xls
Organism
  • 10516Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 875ENCODE
  • 641DGA
  • 534AMP
  • 419T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 169 T2DKP
  • 151GTEx
  • 108T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5323tissue
  • 2483primary cell
  • 2282cell line
  • 470in vitro differentiated cells
  • 4stem cell
Organ
  • 2909vasculature
  • 2846blood vessel
  • 2840bodily fluid
  • 2829blood
  • 2657vein
  • 949epithelium
  • 650kidney
  • 468connective tissue
  • 461brain
  • 377musculature of body
  • 307lung
  • 288intestine
  • 274pancreas
  • 257heart
  • 244limb
  • 214embryo
  • 200skin of body
  • 173large intestine
  • 162liver
  • 145extraembryonic component
  • 119stomach
  • 107eye
  • 99adipose tissue
  • 88bone element
  • 84mammary gland
  • 84small intestine
  • 82uterus
  • 78artery
  • 78prostate gland
  • 73adrenal gland
  • 72placenta
  • 64ureter
  • 62penis
  • 60lymph node
  • 49gonad
  • 49thymus
  • 45esophagus
  • 42spinal cord
  • 34spleen
  • 25nerve
  • 25testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9855AMP
  • 333ENCODE
  • 281KPMP
  • 58T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6900hg19
  • 1907GRCh38
  • 4hg18
files.file_type!
  • xls
month_released!
  • October, 2022
BIOSAMPLE
TYPE

10564 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
sQTL
caQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201215132
stomach4021119311
kidney2914216101711
brain291631821121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell3711529121
cell line
HeLa-S35553
A549211911811
H1-hESC13911118
K5627231711
MCF-7962512
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
embryonic stem cell11561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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