Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
88
histone
88
histone modification
45
narrow histone mark
43
broad histone mark
27
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
11
September, 2018
9
October, 2019
8
August, 2017
5
December, 2017
4
November, 2019
August, 2021
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
1
May, 2019
Available data
45
bam
44
bed narrowPeak
44
bigWig
26
fastq
15
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign
Organism
45
Homo sapiens
Biosample type
33
primary cell
6
cell line
6
in vitro differentiated cells
Organ
117
brain
73
pancreas
56
liver
47
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
embryo
8
nerve
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
43
AMP
2
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
45
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
4
inconsistent control read length
files.file_type!
zippedFastqFolder
month_released!
August, 2021
organ_slims!
embryo
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
6
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 5 more…
cell line
EndoC_BH1
6
in vitro differentiated cells
hepatocyte
5
pancreatic PP cell
1
See all biosamples
Download