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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
25
DNA binding
8
Transcription
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
64
March, 2020
61
November, 2019
49
April, 2018
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
34
fastq
33
bam
29
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
8
tsv
1
bedpe bed3+
Organism
34
Homo sapiens
Biosample type
23
cell line
7
tissue
3
primary cell
1
in vitro differentiated cells
Organ
18
blood
18
bodily fluid
7
spleen
5
liver
3
epithelium
3
pancreas
1
adipose tissue
1
connective tissue
Project
34
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
34
AMP-T2D consortium
files.file_type!
zippedFastqFolder
month_released!
May, 2021
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
pCHi-C
cell line
GM12878
18
HepG2
5
tissue
spleen
7
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
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