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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
2
ATAC-seq
2
pCHi-C
1
ChIP-seq
1
Hi-C
Assay category
14
Transcription
2
DNA accessibility
1
3D chromatin structure
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
121
October, 2019
91
November, 2017
61
September, 2018
53
February, 2023
48
June, 2019
33
April, 2018
33
July, 2018
33
May, 2019
32
February, 2021
29
August, 2017
29
July, 2019
26
May, 2021
19
December, 2017
19
September, 2020
16
November, 2019
16
October, 2017
12
February, 2020
8
March, 2020
7
August, 2020
6
August, 2021
6
December, 2019
6
November, 2020
5
September, 2017
3
August, 2018
3
October, 2022
2
November, 2018
2
October, 2018
1
June, 2018
Available data
17
tsv
5
bigWig
3
bam
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
20
Homo sapiens
Biosample type
14
tissue
5
cell line
1
primary cell
Organ
15
pancreas
14
brain
10
heart
7
blood vessel
7
musculature of body
7
vasculature
6
epithelium
4
connective tissue
4
liver
3
adipose tissue
3
limb
2
artery
2
intestine
2
kidney
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
17
AMP
3
T1D
Genome assembly (visualization)
6
hg19
3
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
20 results
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total RNA-seq
ATAC-seq
pCHi-C
ChIP-seq
Hi-C
tissue
Ammon's horn
1
1
amygdala
1
anterior cingulate cortex
1
caudate nucleus
1
cerebellum
1
+ See 8 more…
cell line
EndoC_BH1
2
2
1
primary cell
endothelial cell of umbilical vein
1
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