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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
6
ATAC-seq
6
ChIP-seq
4
total RNA-seq
1
DNase-seq
Assay category
7
DNA accessibility
6
DNA binding
4
Transcription
Target of assay
11
control
5
nucleotide modification
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
66
May, 2022
61
November, 2019
60
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
17
bam
11
fastq
10
bigWig
7
bed narrowPeak
6
bigBed narrowPeak
4
tsv
3
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
11
primary cell
10
tissue
6
cell line
Organ
21
pancreas
11
epithelium
6
connective tissue
Project
27
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
17
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
zippedFastqFolder
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
27 results
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Clear Filters
MeRIP-seq
ATAC-seq
ChIP-seq
total RNA-seq
DNase-seq
primary cell
osteoblast
1
4
1
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
tissue
islet of Langerhans
4
6
cell line
EndoC_BH1
6
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