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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
28
total RNA-seq
19
ATAC-seq
1
single cell RNA-seq
Assay category
112
DNA binding
29
Transcription
19
DNA accessibility
Target of assay
62
histone
62
histone modification
36
broad histone mark
35
control
26
narrow histone mark
15
transcription factor
11
RNA binding protein
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
66
May, 2022
61
November, 2019
60
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
159
bam
144
fastq
124
bigWig
96
bed narrowPeak
64
bigBed narrowPeak
28
tsv
2
bed bed3+
1
csv
Organism
160
Homo sapiens
Biosample type
80
primary cell
80
tissue
Organ
136
pancreas
68
epithelium
23
adipose tissue
23
connective tissue
Project
160
AMP
Genome assembly (visualization)
126
GRCh38
126
hg19
Lab
160
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
zippedFastqFolder
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
160 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
13
4
4
pancreatic acinar cell
8
4
4
pancreatic beta cell
10
6
pancreatic alpha cell
10
5
pancreatic endocrine cell
11
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tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
islet of Langerhans
6
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