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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
total RNA-seq
48
single cell RNA-seq
18
ATAC-seq
Assay category
170
Transcription
18
DNA accessibility
Date released
571
February, 2021
392
November, 2017
283
May, 2020
277
May, 2021
249
August, 2017
243
October, 2019
164
July, 2018
120
May, 2019
82
July, 2019
79
April, 2019
79
December, 2017
78
November, 2018
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
46
August, 2021
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
9
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
1
March, 2019
Available data
188
bam
184
bigWig
164
tsv
134
zippedFastqFolder
74
fastq
38
bed narrowPeak
7
txt
bed bed3+
Organism
188
Homo sapiens
Biosample type
140
tissue
48
primary cell
Organ
177
pancreas
33
epithelium
2
connective tissue
Project
188
AMP
Genome assembly (visualization)
182
hg19
164
GRCh38
Lab
164
AMP-T2D consortium
24
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
files.file_type!
bed bed3+
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
188 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
122
18
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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