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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
7
ChIP-seq
6
ATAC-seq
1
WGBS
Assay category
38
DNA accessibility
7
DNA binding
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
1
July, 2019
Available data
46
bam
44
bed narrowPeak
39
bigWig
38
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
46
Homo sapiens
Biosample type
46
tissue
Organ
675
pancreas
674
liver
593
connective tissue
442
adipose tissue
epithelium
204
heart
160
brain
139
vasculature
134
blood vessel
116
kidney
76
artery
66
bone element
60
blood
60
bodily fluid
57
musculature of body
46
limb
36
embryo
24
spleen
18
ureter
8
skeleton
7
eye
1
pericardium
Project
46
AMP
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
46
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bedgraph
month_released!
October, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
46 results
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DNase-seq
ChIP-seq
ATAC-seq
WGBS
tissue
muscle of leg
13
7
1
muscle of arm
17
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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