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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
28
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
28
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
22
October, 2019
3
July, 2019
3
May, 2019
2
June, 2019
Available data
96
bam
79
bigWig
68
bed narrowPeak
58
tsv
19
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
96
Homo sapiens
Biosample type
66
cell line
28
tissue
2
primary cell
Organ
631
liver
622
pancreas
576
connective tissue
441
adipose tissue
268
epithelium
187
heart
159
vasculature
155
blood vessel
138
brain
129
kidney
100
limb
96
artery
66
bone element
59
blood
59
bodily fluid
51
musculature of body
34
nerve
28
embryo
22
spleen
18
ureter
14
vein
8
skeleton
eye
1
pericardium
Project
96
AMP
Genome assembly (visualization)
87
GRCh38
87
hg19
Lab
96
AMP-T2D consortium
files.file_type!
bed bedgraph
organ_slims!
eye
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
96 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
19
1
2
coronary artery
3
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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